Index

A

add_message() (ratesb_python.common.results.Results method)

Analyzer (class in ratesb_python.common.analyzer)

B

boundary_species (ratesb_python.common.analyzer.ReactionData attribute)

C

check_all() (ratesb_python.common.analyzer.Analyzer method) check_except() (ratesb_python.common.analyzer.Analyzer method) check_model() (in module ratesb_python.common.analyzer) checks() (ratesb_python.common.analyzer.Analyzer method) clear_results() (ratesb_python.common.results.Results method)

codes (ratesb_python.common.analyzer.ReactionData attribute) compartment_in_kinetic_law (ratesb_python.common.analyzer.ReactionData attribute) count_errors() (ratesb_python.common.results.Results method) count_messages() (ratesb_python.common.results.Results method) count_warnings() (ratesb_python.common.results.Results method)

G

get_all_errors() (ratesb_python.common.results.Results method)

get_all_warnings() (ratesb_python.common.results.Results method) get_messages_by_reaction() (ratesb_python.common.results.Results method)

I

ids_list (ratesb_python.common.analyzer.ReactionData attribute)

is_reversible (ratesb_python.common.analyzer.ReactionData attribute)

K

kinetics (ratesb_python.common.analyzer.ReactionData attribute)

kinetics_sim (ratesb_python.common.analyzer.ReactionData attribute)

L

list_all_checks() (ratesb_python.common.analyzer.Analyzer static method)

list_check() (ratesb_python.common.analyzer.Analyzer static method)

M

module ratesb_python.common.analyzer

N

non_constant_params (ratesb_python.common.analyzer.ReactionData attribute)

P

parameters_in_kinetic_law (ratesb_python.common.analyzer.ReactionData attribute)

parameters_in_kinetic_law_only (ratesb_python.common.analyzer.ReactionData attribute) product_list (ratesb_python.common.analyzer.ReactionData attribute)

R

ratesb_python.common.analyzer module reactant_list (ratesb_python.common.analyzer.ReactionData attribute)

reaction_id (ratesb_python.common.analyzer.ReactionData attribute) ReactionData (class in ratesb_python.common.analyzer) remove_messages_by_reaction() (ratesb_python.common.results.Results method) Results (class in ratesb_python.common.results)

S

sbo_term (ratesb_python.common.analyzer.ReactionData attribute)

sorted_species (ratesb_python.common.analyzer.ReactionData attribute) species_in_kinetic_law (ratesb_python.common.analyzer.ReactionData attribute)